DNA is often called the 'molecule of life'. Within it are the code words that
help build proteins and thus help our bodies to function.

However, most of it doesn't encode for anything at all - we call these regions 'junk DNA' and they contain no medical information whatsoever.

 
     
DNA Heritage uses 43 special markers along the DNA strand in these  
  'junk' regions to read into the genealogy of the person. At these markers, the sequence of bases repeats itself many times (also called STR's - short
tandem repeats).
 
     
  As an example, at a particular marker, our equipment reads the DNA
sequence as:
 
     
     
   
 
where TCTA is repeated 9 times.  
     
 

Because the STR marker is named 'DYS391', we record: DYS391 = 9

At this particular marker, the number of repeats can be anywhere between 7 and 14. The Y-chromosome is special in that it doesn't undergo 'shuffling' with each new generation. When a new baby is conceived, the chromosomes the baby receives will be a mixture from both mother and father.

But the Y-chromosome only comes from the father so the number of repeats in a baby boy will be the same as his father.* The diagram below shows the path of the Y-chromosome which travels down all males lines, thus paternally-related cousins will also share the same Y-chromosome.

 
     
 
 
     
     
     
 
*
Very occasionally these repeats increase or decrease, usually one at a time.

That is, a father may have DYS391 = 9 and his son DYS391 = 10.

We have gained a TCTA somewhere!

This is called a mutation and happens when the DNA is copied slightly incorrectly within the body. It is worth noting that this is a natural phenomenon and is indicative of Darwin's 'Theory of Evolution' working at a molecular scale!
 
     
 

These mutations are very useful because otherwise every male would have exactly the same Y-chromosome. The fact that related males that share the same surname will have identical Y-chromosomes (or at least a very close match), is why Y-chromosomes are so useful to genealogists. It is also very easy to tell if two males aren't related at all.

Also, because we know roughly how often these changes take place, we can also estimate when the most recent common ancestor (MRCA) lived.

 
     
  When we test for many STR's, we obtain a 'haplotype'. This is simply a sequence of numbers from each marker - a bit like a combination to a lock. Using a 21-marker test that DNA Heritage used, your haplotype could look like this:
 
     
     
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Cold Spring Harbor Laboratory
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Example haplotype
   Y-DNA STR Markers (DYS and GATA)
 
19
385a
385b
388
389i
389ii
390
391
392
393
425
426
437
438
439
460
461
462
GATA A10
GATA C4/
DYS635
TAGA H4
  Your Haplotype
14
12
17
12
13
29
24
11
13
13
12
10
15
10
11
10
12
12
12
25
27

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The STR markers are labelled along the top, with the haplotype of the individual given underneath. So for DYS19, read 14 repeats.

And, for example, at GATA A10 read 12 repeats (note: GATA and TAGA are also used for naming STR markers).

 

 
 
       
 
 
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